PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn098161
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family G2-like
Protein Properties Length: 320aa    MW: 35480 Da    PI: 5.2875
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn098161genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like37.26.5e-122954126
     G2-like  1 kprlrWtpeLHerFveaveqLGGsek 26
                +prlrWt +LH+rFv+av++LGG++ 
  Achn098161 29 RPRLRWTADLHDRFVDAVTKLGGPDM 54
                59*********************985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.5E-102664IPR009057Homeodomain-like
PfamPF143794.1E-22134180IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MERGYGGGGS GGVGQYGYES GVVMSRDPRP RLRWTADLHD RFVDAVTKLG GPDMQISIVR  60
VLMSCHYQHF NNCATMIDLL SDSQVGAETN GFKGPDALPL KEPFAGGSYT DYNAYSSGAT  120
TSSSGVNSEP GEIPIAEELR CQIEVQKRLQ EQFEVQKKLQ MRIEAQGKYL QAILEKAQKS  180
LTLDMNCSGS LEVTRAQLTN FNLALSNLVE NMDGESKDGN IIEKKILEDI HRNANRSLYL  240
GEEDEKKDIK LRIGGGFINF DLNTRGSYDF IDIRSRWMLE SKDVAREHEV PENSPTSLPV  300
RVSVPLFNMP SKIRQLTSS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010325600.13e-80PREDICTED: myb family transcription factor APL isoform X1
RefseqXP_011092595.13e-80PREDICTED: myb family transcription factor APL
TrEMBLA0A068UVY12e-81A0A068UVY1_COFCA; Uncharacterized protein
STRINGSolyc08g076010.2.12e-76(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA44162139
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45580.15e-44G2-like family protein